You might need to have someone from your local gas company clean out your line. If fuel is not reaching the pilot, that could be the problem. If you try that and it doesn't work, try checking your user's manual for these pool heaters:
http://www.backyardcitypools.com/images/Hayward/H100-Manual.pdf
If the fan comes on it has to be the ignitor or the ignition module
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