2 wires came disconected inside guitar need to know where the go.

Wiring Diagrams Seymour Duncan Seymour Duncan

This is the best wiring site I know./

Check plug on guitar for loose wire

With standard color coding of wiring, the clear coated should be the negative ground. However, this is not always a guaranteed bet. If you just want the pickup polarity, use a meter on ohms or continuity and test each wire to the pickup body, presuming the body is metal. The body should be ground. Otherwise try http://guitarelectronics.com/guitar-wiring-resources/
or pininterest.com or ultimateguitar.com which have detailed wiring sketches of many pickups and associated wiring.

Go to this site and find a guitar with the same configuration of controsl, pickups, etc as yours to see typical diagram. With CAREFUL inspection and good lighting often you can see where the wire broke from.

Try taking the guitar back to the store where you got it. Recreate the sound. If it is a faulty connection they will know what to do about it.

From this site compare your guitar parts and pick a schematic that appears to be correct.

http://www.guitarelectronics.com/category/wiringresources/

At this site find a guitar diagram that matches the resources of your guitar to find a suitable schematic.

http://www.guitarelectronics.com/category/wiringresources/

Try looking here:http://mediawebsource.com/guitar/pickup.htm .

I don't have a Variax but it sounds like an IC (integrated circuit) inside the guitar is getting hot and until it cools down, it does not function properly. Try the Line 6 website to find the nearest repair center. Good Luck!

http://images.google.com/images?hl=en&q=guitar+wiring+diagrams&um=1&ie=UTF-8&sa=X&oi=image_result_group&resnum=1&ct=title

Here is a bunch of Diagrams courtesy of google images.