Are you saying that you're unplugging the maghnetron and then running it? If so, that's incredibly dangerous.
You're looking at 3000VDC which can kill instantly.
It may be a shorted diode. Unless you have a really good meter, you won't be able to properly bias the diode to be able to fully test it, but they usually short when they fail.
It may also be a bad magnetron. Most often when they fail and make noise, it sounds like someone gargling into an empty coffee cup. Odd, but true.
We have critical information on safety & disassembly at our site,
linked here on Fixya: http://tinyurl.com/yzjozk
You can usually find helpful exploded view diagrams and order parts by entering your full model number here:
http://tinyurl.com/gv383
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I was not able to find safety information by using the above link
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