If you're talking about serious calcified water, that's most likely what's going on- and this unit is going to have to be seriously cleaned. I don't have one of these, but I read where it has a filter- have you found one, and did you change it?
Cuisinart states that it's okay to use a 1/3 vinegar 2/3 water mixture to clean your Brew Central, but you can also use a product like Urnex Cleancaf. Cleancaf is less abrasive than vinegar and is also odorless. To learn more about Urnex Cleancaf, follow the link below:
Cleancaf by Urnex
Here is a manual in case you need one:
Cuisinart Brew Central Product Manual
Perhaps it's just a clogged filter, but if that doesn't work, give it a good cleaning in addition to it's automatic cleaning.
Good luck, and hope this helps.