Question about 2001 Yamaha XVS 650 Dragstar Classic

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2001 Yamaha XVS 650 Dragstar Classic runs fine then bogs

I have a modified XVS 650. The bike starts and runs fine for a few minutes. Then it bogs down and dies. It starts it back up w/ choke, pops and sputters a minute then kicks in and it's fine. this only happens intermittently. Sometimes the bike runs fine. Sometimes this happens 2-3 times in a 5-mile ride. The airbox has been eliminated and the intake is directly into the carbs. @

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