The electric fan should not need to turn on unless the AC is on, E36 M3's have a clutch fan to cool the engine. They also have a robust cooling system, unless you are stuck in traffic on a hot day you can usually drive them all day long with the fan removed and not have an overheating problem. It sounds to me like you may have air in the system or perhaps a faulty thermostat. Is the coolant circulating properly as the engine warms up?
Try checking any fuses and relays related to the cooling fans, replace the relays if your not sure if they are bad. The testing on that may be a little involved as there are a number of things that factor in controlling those fans and when they turn on and off. may be in cheaper for you to just have it diagnosed at a reputable repair shop.
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