O.K. from what you just described- Miss fire on #6 and loss of coolant(it does not just disaper) I'am afraid that these two items are most likely related, along with the fact that it took along time to cool down. It sounds like the coolant is being lost thru#6 cyl thus causing the misfire and the overheating- which turns the light on. Sorry but i am afraid that you may just be spending a lot of $$ Take it to a mechanic and get a second oppinion first.
SOURCE: My 2000 Jaguar S Type has the check engine light
Missfire is usually cause by a bad spark plug or plug wire.
Sometimes can be cause by bad or leak injector.
For coolant, you usually have to fill the system twice when filling. It fills once then while you burp the radiator hose and car is still running, it will slowly drain all fluid from radiator to engine block, when this happens, you then refill the radiator once again and it will be at the proper level.
Check for leaks. Check exhaust too see if you have very white smoke and check oil to see if there is antifreeze in it because this can mean a gasket leak, and that may also be why your cylinder is missing
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I have 2000 Jaguar S-Type myself. It sounds like you may have multiple problems. The misfire on Cylinder 6 could be a your ignition coil is going bad. There is a coil located on each spark plug. These usually have to be replaced after 75K miles. My suggestion is if you have to replace one, then replace all of them. On the six cylinder engines, three of the coils are located under the intake manifold (expensive to repair, dealers price is $600). The intake manifold needs to be removed to access the coils. The other three can be accessed by removing the plastic cover. Regarding the cool down time. Does your electric radiator fan stay on after you shut off your engine? It should remain on for a couple of minutes after turning off the engine and it should be on when the engine is warmed-up. If your car is over heating, the red temperature light on the dash will turn-on and your temperature gage will read high. Regarding the missing antifreeze. The antifreeze could be leaking out of your reservior cap. Check to see if you have any pressure or feel air/water coming out of the cap. If so, the cap will need to be replaced. Becareful, the water will be extremely hot. If you cannot detect any visual leaks or steam coming from any of the hoses, then the antifreeze maybe leaking internally. Check to see if you have any white smoke coming from the exhaust pipe. Without correctly knowing what the root cause is of the problems you are having, it would be difficult to advise you on what to fix without further trouble-shooting. To avoid spending alot of money on repairs, my recommendation is to find a general mechanic with some knowledge on Jaguars. Jaguars usually require certified trained mechanics to work on these types of cars. The repair manuals are often very diffilcult to obtain without spending hundreds of dollars.
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