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Dna problem... plz..help me..this is our laboratory problem... we must use linked list... Adam, a PhD in Biology student, was having a problem with his subject in bio informatics. He would like to know if a certain string is present on the given sequence placed on a text file. He would like to know the location of the occurrence and how many times it occurred? Requirement: Create an algorithm that will solve the problem being stated. The solution should be implemented using linked list/chains. Compare pattern in ?textfile.txt?. For testing the correctness of program, use ?textfile_test.txt?. Example: search pattern: tat Output: String present: tat Appeared: 4 times Occurrence 1: Occurrence 2: Occurrence 3: Occurrence 4: *try other strings For parent classes and interfaces needed, see ?data structures? folder inside our folder.

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Sir that is a school poject and i cannot assist you with such, cause projects like this although they seem hard, are actrually quite simple..

1.) Plan out exactly what needs to be done
2.) figure out how to get it done
3.) do it as planned..

for examply yours is 1.) open a file
2.) get the value of the string to be seached
3.) Search the string
If found, record location, update
occurence
4.) Update results

5.) GET A GOOD GRADE

There are a lot of source code aviable on the net.. You didnt specify which language you were using, here a a site with tons of written applications, source code and tutorials..

www.planetsourcecode.com



Posted on Jan 22, 2008

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