I would look for a vacum leak on the control valve for the heater. There are 2 lines from the radiator leading back to the firewall. One has a control valve on it that should be vacum controlled. When you back flushed to the heater core you may have forced this valve open temporarily. The control may have low vacum or insufficient vacum to open a stuck valve. The good news is you can actually manually open this valve and tie it in the open position which will at least temporarily solve the problem. Check your vacum lines for leaks and check the valve to make sure it isn't sticking.
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