Car dosnt start

SOURCE: 1999 Honda Civic EX fault codes 1366 and 1399

This code is not documented so the code reader is giving a false reading.
If the car runs OK and check engine light is not on, I would forget about it.

SOURCE: Code error P1361 Honda CIvic LX 2002

P1361 TDC Sensor Intermittent Interruption (I got this from Engine-Light-Help.com)
TDC should mean Top Dead Center.
It is the sensor that tells the computer the #1 cylinder piston is at the very top. And therefore, fires the spark plug.

Since the maintenance done above, I believe the the timing marks for the timing belt is not lined up properly. Being off by one tooth will cause this problem.

SOURCE: check engine light

P0041 Downstream Oxygen Sensors Swapped From Bank To Bank
How does a P0041 code trigger the check engine light? This code will trigger the light to come on under the following condition:

The Heated Oxygen Sensor Monitor, a strategy built into the computer, determines if the Heated Oxygen Sensor (HO2S) signal response for a change in fuel trim corresponds to the correct engine bank. If a response from the Oxygen Sensor being tested is not indicated, a trouble code will be set and the MIL (Malfunction Indicator Lamp) will illuminate.
Possible Causes:
Crossed Heated Oxygen Sensor harness connectors
Wiring swapped from one Oxygen Sensor connector to the other
Wiring changed at the computer connection or in the related harness

SOURCE: 2002Honda civic ex jerks and hesitates when not accelerating

I would have the catylic convertor checked.
Then have the transmission check . I am guessing the transmission is automatic. The torque convertor could be shuttering when slowing down to a stop.

SOURCE: overheats once in a wile no codes on scanner.

I have a 2002 Honda Civic Ex, it has been over heating but only in stop and go traffic, never on the freeway, i have replaced, timing belt, water pump, cooling fan relay, cooling fan switch, flushed radiator. There is no white smoke coming from the tail pipe and the oil is clean, when the car gets hot i can smell the coolant pretty strong, car has never completly overheated gets about 3/4 of the way til red.