2005 cavalier misfiring on #2 and #3 cylinders.

It sounds like something not put back correctly or adjusted. Was the slave cylinder arm push in when you bled the system? There may be air behind it. Did you use a pressure bleed system, slave up to Master. Lots of help in the links.

https://www.google.com/search?q=2005+6+hyundai+tucson+clutch+master+cylinder+replacement

https://www.google.com/search?q=2005+6+hyundai+tucson+clutch+adjustment

i expect the clutch cylinder piston has over rode the end stop , you will have to remove/replace the clutch slave cylinder, get a workshop manual , will give you a step by step guide

HYDRAULIC SYSTEM BLEEDING Do not use fluid which has been bled from a system to fill the reservoir as it may be aerated, have too much moisture content or possibly be contaminated. Clean the dirt and grease from the cap to ensure that no foreign substances enter the system. It is also important to maintain the fluid level in the clutch reservoir to the top step with hydraulic clutch fluid Hydraulic Clutch Fluid GM P/N 12345347 or equivalent.

1. Attach a hose to the bleeder screw on the clutch actuator assembly and submerge the other end of the hose in a container of hydraulic clutch fluid.
2. Depress the clutch pedal slowly and hold.
3. Loosen the bleeder screw to purge air.
4. Tighten the bleeder screw to 18 inch lbs. (2 Nm).
5. Let up on the clutch pedal.
6. Repeat Steps 2 through 5 until all air is purged from the system.
7. Fill the reservoir to the top step with hydraulic clutch fluid.
8. Repeat this bleeding procedure if there is a grinding noise during the clutch spin down procedure.

Cylinder Head Removal & Installation SOHC To Remove:

1. Relieve fuel system pressure.
2. Remove timing belt cover. Camshaft timing marks
   
   
3. Turn crankshaft until timing mark on front housing and the arrow "2" on the camshaft pulley align.
4. Loosen lock bolt on tensioner.
5. Pry tensioner away from timing belt and tighten lock bolt to relieve tension on the timing belt.
6. Remove timing belt from camshaft pulley.
7. Disconnect battery negative cable.
8. Remove 3 bolts that secure accelerator cable and air intake hose to cylinder head cover.
9. Detach accelerator cable and place off to side.
10. Remove the following;
    • Air hose
    • Air ISC air hose
    • Breather hose
    • Vacuum hose from air intake hose
11. Disconnect mass air flow sensor electrical connector.
12. Remove air intake hose.
13. Remove PCV valve from cylinder head cover.
14. Remove ISC air hose from idle speed actuator.
15. Remove air hose from behind intake manifold.
16. Remove 2 screws from high tension wire protectors.
17. Detach wire loom from holder at rear of cylinder head cover.
18. Detach vacuum tube at rear of cylinder head cover.
19. Remove vacuum pipe. Cylinder Head Cover
    
    
20. Remove 7 cylinder head cover bolts.
21. Remove cylinder head cover and gasket.
22. Disconnect 2 ignition coil electrical connectors.
23. Disconnect 2 fuel injection electrical connectors at rear of cylinder head.
24. Disconnect the following electrical connectors;
    • Oxygen sensor
    • Throttle position sensor
    • Idle speed actuator
    • Oil pressure switch
    • EGR vacuum solenoid valve at intake manifold
25. Disconnect heater hose from elbow.
26. Disconnect brake booster vacuum hose and cruise control vacuum hose from surge tank.
27. Detach wire harness from rear of cylinder head.
28. Disconnect purge control solenoid vacuum hose from intake manifold.
29. Disconnect fuel hose from fuel connector assembly.
30. Remove grounding bracket.
31. Remove 4 bolts and intake manifold bracket.
32. Remove starter.
33. Detach water bypass hose from bypass pipe.
34. Disconnect water hoses from oil cooler.
35. Disconnect fuel hose from fuel pipe.
36. Remove exhaust manifold heat shield.
37. Remove exhaust flange nuts and front exhaust bracket bolt.
38. Lower exhaust system. Cylinder head bolt loosening sequence
    
    
39. Loosen cylinder head bolts in 3 steps in proper sequence.
40. Remove cylinder head bolts and washers.
41. Remove cylinder head, intake manifold and exhaust manifold as an assembly.

To Install:

1. Install NEW cylinder head gasket.
2. Install cylinder head, intake manifold and exhaust manifold as an assembly.
3. Tighten cylinder head bolts in 3 steps in reverse sequence that was used during removal. Tighten bolts to 62 ft lb (84 Nm).
4. Install front exhaust bracket bolt. Tighten bolt to 20 ft lb (27 Nm).
5. Install NEW lower exhaust flange gasket and 3 nuts. Tighten nuts to 24 ft lb (31 Nm).
6. Install exhaust manifold heat shield. Tighten nuts to 35 in lb (4 Nm).
7. Connect fuel hose to pipe.
8. Connect 2 hoses to oil cooler.
9. Attach water bypass hose to bypass pipe.
10. Install starter and bolts. Tighten bolts to 34 ft lb (46 Nm).
11. Install intake manifolds bracket and 4 bolts. Tighten bolts to 32 ft lb (45 Nm).
12. Install grounding bracket.
13. Connect fuel hose to fuel connector assembly.
14. Connect the following electrical connectors;
    • Oxygen sensor
    • Throttle position sensor
    • Idle speed actuator
    • Oil pressure switch
    • EGR vacuum solenoid valve at intake manifold
15. Connect purge control solenoid vacuum hose to intake manifold.
16. Attach wire harness from rear of cylinder head.
17. Connect brake booster vacuum hose and cruise control vacuum hose to surge tank.
18. Connect heater hose to elbow.
19. Connect 2 fuel injection electrical connectors at rear of cylinder head.
20. Connect 2 ignition coil electrical connectors.
21. Install cylinder head cover.
22. Install 7 cylinder head cover bolts. Tighten bolts to 60 in lb (7 Nm).
23. Install vacuum pipe and 2 bolts at rear of cylinder head cover. Tighten bolts to 60 in lb (7 Nm).
24. Connect vacuum tube to pipe.
25. Connect loom holder to rear of cylinder head cover.
26. Install 2 screws to high tension wire protectors.
27. Install air hose to behind intake manifold.
28. Install ISC air hose to idle speed actuator.
29. Install PCV valve to cylinder head cover.
30. Install air intake hose.
31. Connect mass air flow sensor electrical connector.
32. Install the following;
    • Air hose
    • Air ISC air hose
    • Breather hose
    • Vacuum hose from air intake hose
33. Attach accelerator cable.
34. Install 3 bolts that secure accelerator cable and air intake hose to cylinder head cover. Timing belt pulley timing marks
    
    NOTE: Timing belt pulley timing mark and timing mark must be aligned.
    Camshaft timing marks
    
    NOTE: The arrow at "2" on camshaft pulley must be aligned with timing mark on front housing.
    
35. Install timing belt.
36. Install timing belt cover.
37. Pressurize fuel system.
38. Start engine and check ignition timing.

external if it's like my 1979 Honda. Internal if like the following information:
Slave Cylinder on 1999 Chevrolet Cavalier
REMOVAL & INSTALLATION

1. Disconnect the negative battery cable.
2. Detach the master cylinder assembly from the actuator cylinder by disconnecting the hydraulic line.
3. Remove the transaxle assembly, as outlined earlier in this section.
4. Remove the clutch actuator cylinder from the transaxle. Fig. 1: Clutch actuator cylinder assembly mounting
   To install:
   
5. Lubricate the inside diameter of the bearing with clutch bearing lubricant GM part no. 12345777 or equivalent.
6. Install the actuator cylinder in the transaxle, then install the transaxle assembly.
7. Connect the master cylinder-to-actuator hydraulic line.
8. Bleed the hydraulic system, as outlined later in this section.
9. If removed, install the air intake duct.
10. Connect the negative battery cable.

a Master rates about a 5 out of 10 with 10 being the hardest

you may find the hardest part is the actual bench bleeding of the master
and/or
the replacement of the reservoir

These are the instructions from my service manual, but I do not remove the fluid prior to service steps 2-6

1. Disconnect battery ground cable. Disconnect electrical connector from filler cap.
2. Remove fluid reservoir filler cap.
3. Raise and support vehicle.
4. Remove front wheels.
5. Remove dust cap and loosen bleed nipple. Connect a bleed tube to bleed nipple and into a suitable container.
6. Pump brake pedal until all fluid is expelled. Tighten bleed nipple.
7. Lower vehicle. Install brake fluid reservoir cap. Remove air cleaner and air cleaner outlet tube.
8. Disconnect central electrical box electrical connector.
9. Remove central electrical box retaining screw.
10. Remove central electrical box and relocate to air cleaner area.
11. Disconnect brake fluid feed tube. Disconnect brake lines.
12. On models with anti-lock brakes, disconnect brake lines from Hydraulic Control Unit.
13. On all models, remove brake booster vacuum hose.
14. Extract master cylinder from vehicle.
15. On models with manual transaxles, remove clutch hose from brake/clutch reservoir.
16. On all models, remove master cylinder nuts and remove master cylinder.

To install, reverse removal procedure. Bleed brake system.

Check for fluid leaks first along the line. Also check the mechanical linkage. Then try bleeding it. Changing the master cylinder is your last resort. That way you dont buy parts you don't need.

1. Disconnect the positive and negative cables from the battery. Disconnect the 2 bolts that connect the battery hold down bracket to the vehicle. All of that was done with a 10 mm socket. Remove the battery it and the plastic tray that it sits on from the vehicle. 2. Loosen the large clamp that secures the engine air intake to the big black plastic box that houses the air filter with a 10 mm socket or a large phillips screwdriver. 3. Unplug the large electrical connector from the top of the air filter box by pressing the tab on the plastic connector and pulling. Unplug the small electrical connector from that same box top in the same manner. This 2nd plug plus a small black air hose the size of your finger are just below and to the left of the master cylinder when you are looking at the engine from the front. Squeeze the hose clamp with plyers and remove that small hose also. 4. Remove the top of the air filter box and the air filter. 5. Remove 3 10 mm bolts from the bottom of the now empty air filter box and pull the box out of the vehicle to gain access to the starter. 6. Depress the tab on the small wire connection that is attached to the starter and pull the wire out in the direction of where the battery had been. This tab was hard to find and press and I ended up getting a mirror to be able to see the tab and what needed to be depressed. I pressed from the bottom up and then pulled the connector out to my right. 7. Remove the 2 starter bolts that hold it to the engine block with a 14mm socket. 8. The starter was snug but you should be able to pull it out (to your right) and flip it up so that the starter gear is pointing towards you to have access to the large cable that is hooked to the starter for power. 9. Use 2 small screwdrivers to slip under the snaps on the plastic connector cover. Open it and slide it back down the cable. 10. Using a 12mm socket, remove the power cable from the starter. 11. Reverse this process to put the new starter in.

Change 1999 Lexus RX 300 Starter

Here are some steps:
1. Disconnect the positive and negative cables from the battery. Disconnect the 2 bolts that connect the battery hold down bracket to the vehicle. All of that was done with a 10 mm socket. Remove the battery it and the plastic tray that it sits on from the vehicle.
2. Loosen the large clamp that secures the engine air intake to the big black plastic box that houses the air filter with a 10 mm socket or a large phillips screwdriver.
3. Unplug the large electrical connector from the top of the air filter box by pressing the tab on the plastic connector and pulling. Unplug the small electrical connector from that same box top in the same manner. This 2nd plug plus a small black air hose the size of your finger are just below and to the left of the master cylinder when you are looking at the engine from the front. Squeeze the hose clamp with plyers and remove that small hose also.
4. Remove the top of the air filter box and the air filter.
5. Remove 3 10 mm bolts from the bottom of the now empty air filter box and pull the box out of the vehicle to gain access to the starter.
6. Depress the tab on the small wire connection that is attached to the starter and pull the wire out in the direction of where the battery had been. This tab was hard to find and press and I ended up getting a mirror to be able to see the tab and what needed to be depressed. I pressed from the bottom up and then pulled the connector out to my right.
7. Remove the 2 starter bolts that hold it to the engine block with a 14mm socket.
8. The starter was snug but you should be able to pull it out (to your right) and flip it up so that the starter gear is pointing towards you to have access to the large cable that is hooked to the starter for power.
9. Use 2 small screwdrivers to slip under the snaps on the plastic connector cover. Open it and slide it back down the cable.
10. Using a 12mm socket, remove the power cable from the starter.
11. Reverse this process to put the new starter in.
12. Enjoy the praise that your wife gives you for a job well done!

Good luck, and remember rated this help.

Brake Lines and Hoses
Double-walled steel line is used in the hydraulic lines between the brake master cylinder and the front tube connector, and between the brake master cylinder and the flexible brake hose at the rear wheels.
Double-flared brake lines provide good leak-proof connections.
When replacing hydraulic brake lines, hoses, or connectors, tighten all connections securely. After replacement, bleed the brake system; refer to Section 206-00 .
The wet appearance of the outer cover of the rubber brake hose is referred to as "sweating." This is a normal condition for neoprene rayon braid hose and is not a sign of leakage or cause for replacement of the hose.

Hydraulic Brake System Components — Non-ABS


Item Part Number Description 1 2005 Power Brake Booster 2 2455 Brake Pedal 3 2261 Rear Wheel Cylinder 4 2552 Rear Disc Brake Caliper— (Mexico Only) 5 2B120 Disc Brake Caliper—, Front 6 2B091 Brake Pressure Control Valves 7 2140 Brake Master Cylinder